| Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq I Tirosh, B Izar, SM Prakadan, MH Wadsworth, D Treacy, JJ Trombetta, ... Science 352 (6282), 189-196, 2016 | 2703 | 2016 |
| Highly multiplexed imaging of single cells using a high-throughput cyclic immunofluorescence method JR Lin, M Fallahi-Sichani, PK Sorger Nature communications 6 (1), 1-7, 2015 | 347 | 2015 |
| The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ... Cell systems 6 (1), 13-24, 2018 | 294 | 2018 |
| Metrics other than potency reveal systematic variation in responses to cancer drugs M Fallahi-Sichani, S Honarnejad, LM Heiser, JW Gray, PK Sorger Nature chemical biology 9 (11), 708-714, 2013 | 287 | 2013 |
| Adaptive resistance of melanoma cells to RAF inhibition via reversible induction of a slowly dividing de‐differentiated state M Fallahi‐Sichani, V Becker, B Izar, GJ Baker, JR Lin, SA Boswell, P Shah, ... Molecular systems biology 13 (1), 905, 2017 | 201 | 2017 |
| Multiscale computational modeling reveals a critical role for TNF-α receptor 1 dynamics in tuberculosis granuloma formation M Fallahi-Sichani, M El-Kebir, S Marino, DE Kirschner, JJ Linderman The Journal of Immunology 186 (6), 3472, 2011 | 174 | 2011 |
| Differential Risk of Tuberculosis Reactivation among Anti-TNF Therapies Is Due to Drug Binding Kinetics and Permeability M Fallahi-Sichani, JAL Flynn, JJ Linderman, DE Kirschner The Journal of Immunology, 2012 | 109 | 2012 |
| Lipid raft-mediated regulation of G-protein coupled receptor signaling by ligands which influence receptor dimerization: A computational study M Fallahi-Sichani, JJ Linderman PLoS One 4 (8), e6604, 2009 | 97 | 2009 |
| NF-κB signaling dynamics play a key role in infection control in tuberculosis M Fallahi-Sichani, DE Kirschner, JJ Linderman Frontiers in physiology 3, 170, 2012 | 92 | 2012 |
| Systematic analysis of BRAFV600E melanomas reveals a role for JNK/c‐Jun pathway in adaptive resistance to drug‐induced apoptosis M Fallahi‐Sichani, NJ Moerke, M Niepel, T Zhang, NS Gray, PK Sorger Molecular systems biology 11 (3), 797, 2015 | 91 | 2015 |
| Cyclic immunofluorescence (CycIF), a highly multiplexed method for single‐cell imaging JR Lin, M Fallahi‐Sichani, JY Chen, PK Sorger Current protocols in chemical biology 8 (4), 251-264, 2016 | 88 | 2016 |
| Nanofibrous poly (ε-caprolactone)/poly (vinyl alcohol)/chitosan hybrid scaffolds for bone tissue engineering using mesenchymal stem cells Y Mohammadi, M Soleimani, M Fallahi-Sichani, A Gazme, V Haddadi-Asl, ... The International journal of artificial organs 30 (3), 204-211, 2007 | 82 | 2007 |
| In vitro differentiation of cord blood unrestricted somatic stem cells expressing dopamine-associated genes into neuron-like cells M Fallahi-Sichani, M Soleimani, SMA Najafi, J Kiani, E Arefian, A Atashi Cell biology international 31 (3), 299-303, 2007 | 72 | 2007 |
| Identification of key processes that control tumor necrosis factor availability in a tuberculosis granuloma M Fallahi-Sichani, MA Schaller, DE Kirschner, SL Kunkel, JJ Linderman PLoS computational biology 6 (5), e1000778, 2010 | 57 | 2010 |
| Tuneable resolution as a systems biology approach for multi‐scale, multi‐compartment computational models DE Kirschner, CA Hunt, S Marino, M Fallahi‐Sichani, JJ Linderman Wiley Interdisciplinary Reviews: Systems Biology and Medicine 6 (4), 289-309, 2014 | 52 | 2014 |
| Dissecting murine muscle stem cell aging through regeneration using integrative genomic analysis A Shcherbina, J Larouche, P Fraczek, BA Yang, LA Brown, JF Markworth, ... Cell reports 32 (4), 107964, 2020 | 20 | 2020 |
| Epigenetic mechanisms of escape from BRAF oncogene dependency M Khaliq, M Fallahi-Sichani Cancers 11 (10), 1480, 2019 | 19 | 2019 |
| A Systems Biology Approach for Understanding Granuloma Formation and Function in Tuberculosis M Fallahi-Sichani, S Marino, JAL Flynn, JJ Linderman, DE Kirschner Systems Biology of Tuberculosis, 127, 2013 | 14 | 2013 |
| Phenotype-based probabilistic analysis of heterogeneous responses to cancer drugs and their combination efficacy N Comandante-Lou, M Khaliq, D Venkat, M Manikkam, M Fallahi-Sichani PLoS computational biology 16 (2), e1007688, 2020 | 7 | 2020 |
| Epigenetic modulation reveals differentiation state specificity of oncogene addiction M Khaliq, M Manikkam, ED Martinez, M Fallahi-Sichani Nature communications 12 (1), 1-15, 2021 | 6 | 2021 |
Peter K. SorgerHarvard Medical SchoolVerified email at hms.harvard.edu
