| Big data: astronomical or genomical? ZD Stephens, SY Lee, F Faghri, RH Campbell, C Zhai, MJ Efron, R Iyer, ... PLoS biology 13 (7), e1002195, 2015 | 1735 | 2015 |
| Assessing computational tools for the discovery of transcription factor binding sites M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ... Nature biotechnology 23 (1), 137-144, 2005 | 1620 | 2005 |
| The genome of a songbird WC Warren, DF Clayton, H Ellegren, AP Arnold, LDW Hillier, A Künstner, ... Nature 464 (7289), 757-762, 2010 | 978 | 2010 |
| Functional and evolutionary insights from the genomes of three parasitoid Nasonia species JH Werren, S Richards, CA Desjardins, O Niehuis, J Gadau, ... Science 327 (5963), 343, 2010 | 940 | 2010 |
| Motif module map reveals enforcement of aging by continual NF-κB activity AS Adler, S Sinha, TLA Kawahara, JY Zhang, E Segal, HY Chang Genes & development 21 (24), 3244, 2007 | 584 | 2007 |
| Genomic signatures of evolutionary transitions from solitary to group living KM Kapheim, H Pan, C Li, SL Salzberg, D Puiu, T Magoc, HM Robertson, ... Science 348 (6239), 1139-1143, 2015 | 406 | 2015 |
| YMF: A program for discovery of novel transcription factor binding sites by statistical overrepresentation S Sinha, M Tompa Nucleic acids research 31 (13), 3586-3588, 2003 | 340 | 2003 |
| Honey bee aggression supports a link between gene regulation and behavioral evolution C Alaux, S Sinha, L Hasadsri, GJ Hunt, E Guzmán-Novoa, ... Proceedings of the National Academy of Sciences 106 (36), 15400-15405, 2009 | 318 | 2009 |
| A statistical method for finding transcription factor binding sites S Sinha, M Tompa Proc Int Conf Intell Syst Mol Biol 8 (1553-0833), 344-54, 2000 | 300 | 2000 |
| Discovery of novel transcription factor binding sites by statistical overrepresentation S Sinha, M Tompa Nucleic Acids Research 30 (24), 5549-5560, 2002 | 298 | 2002 |
| A probabilistic method to detect regulatory modules S Sinha, E Van Nimwegen, ED Siggia Bioinformatics 19 (suppl 1), i292, 2003 | 279 | 2003 |
| PhyME: a probabilistic algorithm for finding motifs in sets of orthologous sequences S Sinha, M Blanchette, M Tompa BMC bioinformatics 5 (1), 170, 2004 | 256 | 2004 |
| Intravital imaging by simultaneous label-free autofluorescence-multiharmonic microscopy S You, H Tu, EJ Chaney, Y Sun, Y Zhao, AJ Bower, YZ Liu, M Marjanovic, ... Nature communications 9 (1), 2125, 2018 | 253 | 2018 |
| FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system LJ Zhu, RG Christensen, M Kazemian, CJ Hull, MS Enuameh, ... Nucleic Acids Research 39 (suppl 1), D111, 2011 | 249 | 2011 |
| A graph theoretic approach to software watermarking R Venkatesan, V Vazirani, S Sinha Information Hiding, 157-168, 2001 | 248 | 2001 |
| Oblivious hashing: A stealthy software integrity verification primitive Y Chen, R Venkatesan, M Cary, R Pang, S Sinha, MH Jakubowski Information Hiding: 5th International Workshop, IH 2002 Noordwijkerhout, The …, 2003 | 225 | 2003 |
| Thermodynamics-based models of transcriptional regulation by enhancers: the roles of synergistic activation, cooperative binding and short-range repression X He, MAH Samee, C Blatti, S Sinha PLoS computational biology 6 (9), e1000935, 2010 | 212 | 2010 |
| A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system MB Noyes, X Meng, A Wakabayashi, S Sinha, MH Brodsky, SA Wolfe Nucleic acids research 36 (8), 2547, 2008 | 206 | 2008 |
| A statistical method for alignment-free comparison of regulatory sequences MR Kantorovitz, GE Robinson, S Sinha Bioinformatics 23 (13), i249-i255, 2007 | 174 | 2007 |
| Neuromolecular responses to social challenge: common mechanisms across mouse, stickleback fish, and honey bee CC Rittschof, SA Bukhari, LG Sloofman, JM Troy, D Caetano-Anollés, ... Proceedings of the national Academy of Sciences 111 (50), 17929-17934, 2014 | 163 | 2014 |
Majid KazemianDepartments of Biochemistry & Computer Science, Purdue UniversityVerified email at purdue.edu
