Multifaceted protein–protein interaction prediction based on Siamese residual RCNN M Chen, CJT Ju, G Zhou, X Chen, T Zhang, KW Chang, C Zaniolo, ... Bioinformatics 35 (14), i305-i314, 2019 | 242 | 2019 |
Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits F Hormozdiari, S Gazal, B van de Geijn, HK Finucane, CJT Ju, PR Loh, ... Nature genetics 50 (7), 1041-1047, 2018 | 156 | 2018 |
MetaPheno: A critical evaluation of deep learning and machine learning in metagenome-based disease prediction N LaPierre, CJT Ju, G Zhou, W Wang Methods 166, 74-82, 2019 | 107 | 2019 |
Molecular events of apical bud formation in white spruce, Picea glauca WEL KAYAL, CCG Allen, CJT JU, ERI Adams, S KING‐JONES, LI Zaharia, ... Plant, Cell & Environment 34 (3), 480-500, 2011 | 104 | 2011 |
Potato, Solanum tuberosum, defense against Colorado potato beetle, Leptinotarsa decemlineata (Say): microarray gene expression profiling of potato by Colorado potato beetle … SD Lawrence, NG Novak, CJT Ju, JEK Cooke Journal of chemical ecology 34 (8), 1013-1025, 2008 | 85 | 2008 |
Widespread allelic heterogeneity in complex traits F Hormozdiari, A Zhu, G Kichaev, CJT Ju, AV Segrè, JWJ Joo, H Won, ... The American Journal of Human Genetics 100 (5), 789-802, 2017 | 83 | 2017 |
Mutation effect estimation on protein–protein interactions using deep contextualized representation learning G Zhou, M Chen, CJT Ju, Z Wang, JY Jiang, W Wang NAR Genomics and Bioinformatics 2 (2), lqaa015, 2020 | 64 | 2020 |
Integrated transcriptomic and proteomic profiling of white spruce stems during the transition from active growth to dormancy LM GALINDO GONZÁLEZ, W El Kayal, CJT JU, CCG Allen, ... Plant, cell & environment 35 (4), 682-701, 2012 | 49 | 2012 |
Root herbivory: molecular analysis of the maize transcriptome upon infestation by Southern corn rootworm, Diabrotica undecimpunctata howardi SD Lawrence, NG Novak, WE Kayal, CJT Ju, JEK Cooke Physiologia plantarum 144 (4), 303-319, 2012 | 22 | 2012 |
Bio-JOIE: Joint Representation Learning of Biological Knowledge Bases J Hao, CJT Ju, M Chen, Y Sun, C Zaniolo, W Wang ACM-BCB, 2020 | 21 | 2020 |
JEDI: Circular RNA Prediction based on Junction Encoders and Deep Interaction among Splice Sites JY Jiang, CJT Ju, J Hao, M Chen, W Wang bioRxiv, 2020 | 16 | 2020 |
CORALS: Who Are My Potential New Customers? Tapping into the Wisdom of Customers' Decisions R Li, JY Jiang, CJT Ju, W Wang Proceedings of the Twelfth ACM International Conference on Web Search and …, 2019 | 16 | 2019 |
Examining the molecular interaction between potato (Solanum tuberosum) and Colorado potato beetle Leptinotarsa decemlineata SD Lawrence, NG Novak, CJT Ju, JEK Cooke Botany 86 (9), 1080-1091, 2008 | 15 | 2008 |
Functional disease architectures reveal unique biological role of transposable elements F Hormozdiari, B van de Geijn, J Nasser, O Weissbrod, S Gazal, CJT Ju, ... Nature communications 10, 2019 | 14 | 2019 |
Fleximer: Accurate Quantification of RNA-Seq via Variable-Length k-mers CJT Ju, R Li, Z Wu, JY Jiang, Z Yang, W Wang Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017 | 13 | 2017 |
Evaluating representations for gene ontology terms D Duong, A Uppunda, L Gai, CJT Ju, J Zhang, M Chen, E Eskin, JJ Li, ... bioRxiv, 765644, 2020 | 10 | 2020 |
Aztec: A Platform to Render Biomedical Software Findable, Accessible, Interoperable, and Reusable W Wang, B Bleakley, C Ju, V Kyi, P Tan, H Choi, X Huang, Y Zhou, ... arXiv preprint arXiv:1706.06087, 2017 | 7 | 2017 |
Prediction of microbial communities for urban metagenomics using neural network approach G Zhou, JY Jiang, CJT Ju, W Wang Human genomics 13 (1), 47, 2019 | 6 | 2019 |
AZTEC: A cloud-based computational platform to integrate biomedical resources P Tan, Y Zhou, X Huang, GM Mazzeo, C Ju, V Kyi, B Bleakley, J Wood, ... 2017 IEEE 33rd International Conference on Data Engineering (ICDE), 1365-1366, 2017 | 6 | 2017 |
Leveraging molecular QTL to understand the genetic architecture of diseases and complex traits F Hormozdiari, S Gazal, B van de Geijn, H Finucane, CJT Ju, PR Loh, ... bioRxiv, 203380, 2017 | 6 | 2017 |