Lee Ann McCue
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FQC Dashboard: integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool
J Brown, M Pirrung, LA McCue
Bioinformatics 33 (19), 3137-3139, 2017
Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes
LA McCue, W Thompson, CS Carmack, MP Ryan, JS Liu, V Derbyshire, ...
Nucleic acids research 29 (3), 774-782, 2001
Transcriptomic and Proteomic Characterization of the Fur Modulon in the Metal-Reducing Bacterium Shewanella oneidensis
XF Wan, NC VerBerkmoes, LA McCue, D Stanek, H Connelly, LJ Hauser, ...
Journal of bacteriology 186 (24), 8385-8400, 2004
Functional classification of cNMP-binding proteins and nucleotide cyclases with implications for novel regulatory pathways in Mycobacterium tuberculosis
LA McCue, KA McDonough, CE Lawrence
Genome Research 10 (2), 204-219, 2000
Characterization of Mycobacterium tuberculosis Rv3676 (CRPMt), a Cyclic AMP Receptor Protein-Like DNA Binding Protein
G Bai, LA McCue, KA McDonough
Journal of bacteriology 187 (22), 7795-7804, 2005
Global profiling of Shewanella oneidensis MR-1: Expression of hypothetical genes and improved functional annotations
E Kolker, AF Picone, MY Galperin, MF Romine, R Higdon, KS Makarova, ...
Proceedings of the National Academy of Sciences 102 (6), 2099-2104, 2005
Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites
ZS Qin, LA McCue, W Thompson, L Mayerhofer, CE Lawrence, JS Liu
Nature biotechnology 21 (4), 435-439, 2003
Identification and characterization of mycobacterial proteins differentially expressed under standing and shaking culture conditions, including Rv2623 from a novel class of …
MA Florczyk, LA McCue, RF Stack, CR Hauer, KA McDonough
Infection and immunity 69 (9), 5777-5785, 2001
Factors influencing the identification of transcription factor binding sites by cross-species comparison
LA McCue, W Thompson, CS Carmack, CE Lawrence
Genome research 12 (10), 1523-1532, 2002
Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park
MA Kozubal, M Romine, RM Jennings, ZJ Jay, SG Tringe, DB Rusch, ...
The ISME journal 7 (3), 622-634, 2013
A Family of acr-Coregulated Mycobacterium tuberculosis Genes Shares a Common DNA Motif and Requires Rv3133c (dosR or devR) for Expression
MA Florczyk, LA McCue, A Purkayastha, E Currenti, MJ Wolin, ...
Infection and immunity 71 (9), 5332-5343, 2003
Comparative systems biology across an evolutionary gradient within the Shewanella genus
KT Konstantinidis, MH Serres, MF Romine, JLM Rodrigues, J Auchtung, ...
Proceedings of the National Academy of Sciences 106 (37), 15909-15914, 2009
Identification of a novel class in the α/β hydrolase fold superfamily: The N‐myc differentiation‐related proteins
E Shaw, LA McCue, CE Lawrence, JS Dordick
Proteins: Structure, Function, and Bioinformatics 47 (2), 163-168, 2002
Linking microbial community structure to β-glucosidic function in soil aggregates
VL Bailey, SJ Fansler, JC Stegen, LA McCue
The ISME journal 7 (10), 2044-2053, 2013
Identification, expression, and deduced primary structure of transketolase and other enzymes encoded within the form II CO2 fixation operon of Rhodobacter sphaeroides.
JH Chen, JL Gibson, LA McCue, FR Tabita
Journal of Biological Chemistry 266 (30), 20447-20452, 1991
Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data
BJM Webb-Robertson, LA McCue, KM Waters, MM Matzke, JM Jacobs, ...
Journal of proteome research 9 (11), 5748-5756, 2010
Identification of a Mycobacterium tuberculosis Putative Classical Nitroreductase Gene Whose Expression Is Coregulated with That of the acr Gene within …
A Purkayastha, LA McCue, KA McDonough
Infection and Immunity 70 (3), 1518-1529, 2002
The Gibbs centroid sampler
WA Thompson, LA Newberg, S Conlan, LA McCue, CE Lawrence
Nucleic acids research 35 (suppl_2), W232-W237, 2007
Comparative bacterial proteomics: analysis of the core genome concept
SJ Callister, LA McCue, JE Turse, ME Monroe, KJ Auberry, RD Smith, ...
PloS one 3 (2), e1542, 2008
The human cytomegalovirus genes and proteins required for DNA synthesis
DG Anders, LA McCue
Intervirology 39 (5-6), 378-388, 1996
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