Systematic discovery of Xist RNA binding proteins C Chu, QC Zhang, ST Da Rocha, RA Flynn, M Bharadwaj, JM Calabrese, ... Cell 161 (2), 404-416, 2015 | 1109 | 2015 |
Structure-based prediction of protein–protein interactions on a genome-wide scale QC Zhang, D Petrey, L Deng, L Qiang, Y Shi, CA Thu, B Bisikirska, ... Nature 490 (7421), 556-560, 2012 | 795 | 2012 |
Structural imprints in vivo decode RNA regulatory mechanisms RC Spitale, RA Flynn, QC Zhang, P Crisalli, B Lee, JW Jung, ... Nature 519 (7544), 486-490, 2015 | 764 | 2015 |
RNA duplex map in living cells reveals higher-order transcriptome structure Z Lu, QC Zhang, B Lee, RA Flynn, MA Smith, JT Robinson, C Davidovich, ... Cell 165 (5), 1267-1279, 2016 | 619 | 2016 |
Landscape and variation of RNA secondary structure across the human transcriptome Y Wan, K Qu, QC Zhang, RA Flynn, O Manor, Z Ouyang, J Zhang, ... Nature 505 (7485), 706-709, 2014 | 597 | 2014 |
A transfer-RNA-derived small RNA regulates ribosome biogenesis HK Kim, G Fuchs, S Wang, W Wei, Y Zhang, H Park, B Roy-Chaudhuri, ... Nature 552 (7683), 57-62, 2017 | 453 | 2017 |
Extensive variation in chromatin states across humans M Kasowski, S Kyriazopoulou-Panagiotopoulou, F Grubert, JB Zaugg, ... Science 342 (6159), 750-752, 2013 | 413 | 2013 |
Revealing lncRNA structures and interactions by sequencing-based approaches X Qian, J Zhao, PY Yeung, QC Zhang, CK Kwok Trends in biochemical sciences 44 (1), 33-52, 2019 | 410 | 2019 |
PrePPI: a structure-informed database of protein–protein interactions QC Zhang, D Petrey, JI Garzón, L Deng, B Honig Nucleic acids research 41 (D1), D828-D833, 2012 | 278 | 2012 |
RNA structure maps across mammalian cellular compartments L Sun, FM Fazal, P Li, JP Broughton, B Lee, L Tang, W Huang, ET Kool, ... Nature structural & molecular biology 26 (4), 322-330, 2019 | 217 | 2019 |
SCALE method for single-cell ATAC-seq analysis via latent feature extraction L Xiong, K Xu, K Tian, Y Shao, L Tang, G Gao, M Zhang, T Jiang, ... Nature communications 10 (1), 4576, 2019 | 213 | 2019 |
In vivo structural characterization of the SARS-CoV-2 RNA genome identifies host proteins vulnerable to repurposed drugs L Sun, P Li, X Ju, J Rao, W Huang, L Ren, S Zhang, T Xiong, K Xu, X Zhou, ... Cell 184 (7), 1865-1883. e20, 2021 | 196 | 2021 |
U1 snRNP regulates chromatin retention of noncoding RNAs Y Yin, JY Lu, X Zhang, W Shao, Y Xu, P Li, Y Hong, L Cui, G Shan, B Tian, ... Nature 580 (7801), 147-150, 2020 | 195 | 2020 |
Rapid evolutionary turnover underlies conserved lncRNA–genome interactions JJ Quinn, QC Zhang, P Georgiev, IA Ilik, A Akhtar, HY Chang Genes & development 30 (2), 191-207, 2016 | 195 | 2016 |
Cryo-EM structure of human dicer and its complexes with a pre-miRNA substrate Z Liu, J Wang, H Cheng, X Ke, L Sun, QC Zhang, HW Wang Cell 173 (5), 1191-1203. e12, 2018 | 192 | 2018 |
Protein interface conservation across structure space QC Zhang, D Petrey, R Norel, BH Honig Proceedings of the National Academy of Sciences 107 (24), 10896-10901, 2010 | 177 | 2010 |
Transcriptome-wide interrogation of RNA secondary structure in living cells with icSHAPE RA Flynn, QC Zhang, RC Spitale, B Lee, MR Mumbach, HY Chang Nature protocols 11 (2), 273-290, 2016 | 168 | 2016 |
Critical roles of long noncoding RNAs in Drosophila spermatogenesis K Wen, L Yang, T Xiong, C Di, D Ma, M Wu, Z Xue, X Zhang, L Long, ... Genome research 26 (9), 1233-1244, 2016 | 164 | 2016 |
Multivalent m6A motifs promote phase separation of YTHDF proteins Y Gao, G Pei, D Li, R Li, Y Shao, QC Zhang, P Li Cell research 29 (9), 767-769, 2019 | 161 | 2019 |
A novel cell culture system modeling the SARS-CoV-2 life cycle X Ju, Y Zhu, Y Wang, J Li, J Zhang, M Gong, W Ren, S Li, J Zhong, ... PLoS pathogens 17 (3), e1009439, 2021 | 145 | 2021 |