| Overview of BioCreative II gene mention recognition L Smith, LK Tanabe, RJ Ando, CJ Kuo, IF Chung, CN Hsu, YS Lin, ... Genome biology 9, 1-19, 2008 | 540 | 2008 |
| The CHEMDNER corpus of chemicals and drugs and its annotation principles M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ... Journal of cheminformatics 7, 1-17, 2015 | 361 | 2015 |
| The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ... BMC bioinformatics 12, 1-19, 2011 | 174 | 2011 |
| NERBio: using selected word conjunctions, term normalization, and global patterns to improve biomedical named entity recognition RTH Tsai, CL Sung, HJ Dai, HC Hung, TY Sung, WL Hsu BMC bioinformatics 7, 1-14, 2006 | 150 | 2006 |
| Various criteria in the evaluation of biomedical named entity recognition RTH Tsai, SH Wu, WC Chou, YC Lin, D He, J Hsiang, TY Sung, WL Hsu BMC bioinformatics 7, 1-8, 2006 | 149 | 2006 |
| Building a concept-level sentiment dictionary based on commonsense knowledge ACR Tsai, CE Wu, RTH Tsai, JY Hsu IEEE Intelligent Systems 28 (2), 22-30, 2013 | 137 | 2013 |
| Reference metadata extraction using a hierarchical knowledge representation framework MY Day, RTH Tsai, CL Sung, CC Hsieh, CW Lee, SH Wu, KP Wu, CS Ong, ... Decision Support Systems 43 (1), 152-167, 2007 | 108 | 2007 |
| Introducing meta-services for biomedical information extraction F Leitner, M Krallinger, C Rodriguez-Penagos, J Hakenberg, C Plake, ... Genome biology 9, 1-11, 2008 | 95 | 2008 |
| Enhancing of chemical compound and drug name recognition using representative tag scheme and fine-grained tokenization HJ Dai, PT Lai, YC Chang, RTH Tsai Journal of cheminformatics 7, 1-10, 2015 | 94 | 2015 |
| New challenges for biological text-mining in the next decade HJ Dai, YC Chang, R Tzong-Han Tsai, WL Hsu Journal of computer science and technology 25 (1), 169-179, 2010 | 81 | 2010 |
| BIOSMILE: a semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features RTH Tsai, WC Chou, YS Su, YC Lin, CL Sung, HJ Dai, ITH Yeh, W Ku, ... BMC bioinformatics 8, 1-15, 2007 | 73 | 2007 |
| A semi-automatic method for annotating a biomedical proposition bank WC Chou, RTH Tsai, YS Su, W Ku, TY Sung, WL Hsu Proceedings of the workshop on frontiers in linguistically annotated corpora …, 2006 | 66 | 2006 |
| T-HOD: a literature-based candidate gene database for hypertension, obesity and diabetes HJ Dai, JCY Wu, RTH Tsai, WH Pan, WL Hsu Database 2013, 2013 | 65 | 2013 |
| TEMPTING system: a hybrid method of rule and machine learning for temporal relation extraction in patient discharge summaries YC Chang, HJ Dai, JCY Wu, JM Chen, RTH Tsai, WL Hsu Journal of biomedical informatics 46, S54-S62, 2013 | 62 | 2013 |
| Mencius: A Chinese named entity recognizer using the maximum entropy-based hybrid model RTH Tsai, SH Wu, CW Lee, CW Shih, WL Hsu International Journal of Computational Linguistics & Chinese Language …, 2004 | 54 | 2004 |
| Multistage gene normalization and SVM-based ranking for protein interactor extraction in full-text articles HJ Dai, PT Lai, RTH Tsai IEEE/ACM Transactions on Computational Biology and Bioinformatics 7 (3), 412-420, 2010 | 46 | 2010 |
| Biomedical named entity recognition and linking datasets: survey and our recent development MS Huang, PT Lai, PY Lin, YT You, RTH Tsai, WL Hsu Briefings in Bioinformatics 21 (6), 2219-2238, 2020 | 43 | 2020 |
| Using relation selection to improve value propagation in a conceptnet-based sentiment dictionary CE Wu, RTH Tsai Knowledge-Based Systems 69, 100-107, 2014 | 43 | 2014 |
| A context-aware approach for progression tracking of medical concepts in electronic medical records NW Chang, HJ Dai, J Jonnagaddala, CW Chen, RTH Tsai, WL Hsu Journal of biomedical informatics 58, S150-S157, 2015 | 42 | 2015 |
| A reinforcement learning approach to emotion-based automatic playlist generation CY Chi, RTH Tsai, JY Lai, JY Hsu 2010 international conference on technologies and applications of artificial …, 2010 | 39 | 2010 |
