Ricardo H. Ramírez-Gonzalez
Ricardo H. Ramírez-Gonzalez
Verified email at jic.ac.uk - Homepage
Title
Cited by
Cited by
Year
Analyses of pig genomes provide insight into porcine demography and evolution
MAM Groenen, AL Archibald, H Uenishi, CK Tuggle, Y Takeuchi, ...
Nature 491 (7424), 393-398, 2012
10262012
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
International Wheat Genome Sequencing Consortium
Science 345 (6194), 2014
9332014
Shifting the limits in wheat research and breeding using a fully annotated reference genome
R Appels, K Eversole, N Stein, C Feuillet, B Keller, J Rogers, CJ Pozniak, ...
Science 361 (6403), 2018
5462018
Assemblathon 1: A competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
5062011
Ancient hybridizations among the ancestral genomes of bread wheat
T Marcussen, SR Sandve, L Heier, M Spannagl, M Pfeifer, KS Jakobsen, ...
science 345 (6194), 2014
3902014
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations
BJ Clavijo, L Venturini, C Schudoma, GG Accinelli, G Kaithakottil, J Wright, ...
Genome research 27 (5), 885-896, 2017
2312017
Uncovering hidden variation in polyploid wheat
KV Krasileva, HA Vasquez-Gross, T Howell, P Bailey, F Paraiso, ...
Proceedings of the National Academy of Sciences 114 (6), E913-E921, 2017
2022017
The transcriptional landscape of polyploid wheat
RH Ramírez-González, P Borrill, D Lang, SA Harrington, J Brinton, ...
Science 361 (6403), 2018
1502018
RNA‐S eq bulked segregant analysis enables the identification of high‐resolution genetic markers for breeding in hexaploid wheat
RH Ramirez‐Gonzalez, V Segovia, N Bird, P Fenwick, S Holdgate, ...
Plant biotechnology journal 13 (5), 613-624, 2015
1412015
expVIP: a customizable RNA-seq data analysis and visualization platform
P Borrill, R Ramirez-Gonzalez, C Uauy
Plant physiology 170 (4), 2172-2186, 2016
1152016
PolyMarker: a fast polyploid primer design pipeline
RH Ramirez-Gonzalez, C Uauy, M Caccamo
Bioinformatics 31 (12), 2038-2039, 2015
962015
Field pathogenomics reveals the emergence of a diverse wheat yellow rust population
A Hubbard, CM Lewis, K Yoshida, RH Ramirez-Gonzalez, ...
Genome biology 16 (1), 23, 2015
942015
Genome sequence and genetic diversity of European ash trees
ESA Sollars, AL Harper, LJ Kelly, CM Sambles, RH Ramirez-Gonzalez, ...
Nature 541 (7636), 212-216, 2017
862017
Evolution of an Eurasian Avian-like Influenza Virus in Naïve and Vaccinated Pigs
PR Murcia, J Hughes, P Battista, L Lloyd, GJ Baillie, ...
PLoS Pathogens 8 (5), e1002730, 2012
832012
Sequencing quality assessment tools to enable data-driven informatics for high throughput genomics
RM Leggett, RH Ramirez-Gonzalez, B Clavijo, D Waite, RP Davey
Frontiers in Genetics 4, 288, 2013
792013
Speed breeding in growth chambers and glasshouses for crop breeding and model plant research
S Ghosh, A Watson, OE Gonzalez-Navarro, RH Ramirez-Gonzalez, ...
Nature protocols 13 (12), 2944-2963, 2018
572018
Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments
RH Ramirez-Gonzalez, R Bonnal, M Caccamo, D MacLean
Source code for biology and medicine 7 (1), 6, 2012
55*2012
Impact of transposable elements on genome structure and evolution in bread wheat
T Wicker, H Gundlach, M Spannagl, C Uauy, P Borrill, ...
Genome biology 19 (1), 1-18, 2018
472018
Mutation scanning in wheat by exon capture and next-generation sequencing
R King, N Bird, R Ramirez-Gonzalez, JA Coghill, A Patil, K Hassani-Pak, ...
PLoS One 10 (9), e0137549, 2015
442015
Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics
RJP Bonnal, J Aerts, G Githinji, N Goto, D MacLean, CA Miller, H Mishima, ...
Bioinformatics 28 (7), 1035-1037, 2012
372012
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Articles 1–20