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Karl R. Clauser
Karl R. Clauser
Principal Research Scientist, Broad Institute of MIT and Harvard
在 broadinstitute.org 的电子邮件经过验证
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引用次数
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年份
Proteogenomics connects somatic mutations to signalling in breast cancer
P Mertins, DR Mani, KV Ruggles, MA Gillette, KR Clauser, P Wang, ...
Nature 534 (7605), 55-62, 2016
15402016
Role of accurate mass measurement (±10 ppm) in protein identification strategies employing MS or MS/MS and database searching
KR Clauser, P Baker, AL Burlingame
Analytical chemistry 71 (14), 2871-2882, 1999
14631999
MitoCarta2. 0: an updated inventory of mammalian mitochondrial proteins
SE Calvo, KR Clauser, VK Mootha
Nucleic acids research 44 (D1), D1251-D1257, 2016
13432016
Dimerization of the extracellular domain of the human growth hormone receptor by a single hormone molecule
BC Cunningham, M Ultsch, AM de Vos, MG Mulkerrin, KR Clauser, ...
Science 254 (5033), 821-825, 1991
12691991
The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices
A Naba, KR Clauser, S Hoersch, H Liu, SA Carr, RO Hynes
Molecular & Cellular Proteomics 11 (4), 2012
11512012
The extracellular matrix: Tools and insights for the “omics” era
A Naba, KR Clauser, H Ding, CA Whittaker, SA Carr, RO Hynes
Matrix Biology 49, 10-24, 2016
9292016
De Novo Peptide Sequencing via Tandem Mass Spectrometry
V Dančík, TA Addona, KR Clauser, JE Vath, PA Pevzner
Journal of computational biology 6 (3-4), 327-342, 1999
8181999
Integrated proteomic analysis of post-translational modifications by serial enrichment
P Mertins, JW Qiao, J Patel, ND Udeshi, KR Clauser, DR Mani, ...
Nature methods 10 (7), 634-637, 2013
6502013
Repeatability and reproducibility in proteomic identifications by liquid chromatography− tandem mass spectrometry
DL Tabb, L Vega-Montoto, PA Rudnick, AM Variyath, AJL Ham, DM Bunk, ...
Journal of proteome research 9 (2), 761-776, 2010
6302010
Mass spectrometry profiling of HLA-associated peptidomes in mono-allelic cells enables more accurate epitope prediction
JG Abelin, DB Keskin, S Sarkizova, CR Hartigan, W Zhang, J Sidney, ...
Immunity 46 (2), 315-326, 2017
5782017
The need for guidelines in publication of peptide and protein identification data: Working Group on Publication Guidelines for Peptide and Protein Identification Data
S Carr, R Aebersold, M Baldwin, AL Burlingame, K Clauser, A Nesvizhskii
Molecular & Cellular Proteomics 3 (6), 531-533, 2004
5722004
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities
S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ...
Cell 177 (4), 1035-1049. e19, 2019
5682019
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma
MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ...
Cell 182 (1), 200-225. e35, 2020
4582020
A breast cancer stem cell niche supported by juxtacrine signalling from monocytes and macrophages
H Lu, KR Clauser, WL Tam, J Fröse, X Ye, EN Eaton, F Reinhardt, ...
Nature cell biology 16 (11), 1105-1117, 2014
4422014
Extracellular matrix signatures of human mammary carcinoma identify novel metastasis promoters
A Naba, KR Clauser, JM Lamar, SA Carr, RO Hynes
elife 3, e01308, 2014
4272014
Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels
P Mertins, F Yang, T Liu, DR Mani, VA Petyuk, MA Gillette, KR Clauser, ...
Molecular & cellular proteomics 13 (7), 1690-1704, 2014
3942014
Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry
P Mertins, LC Tang, K Krug, DJ Clark, MA Gritsenko, L Chen, KR Clauser, ...
Nature protocols 13 (7), 1632-1661, 2018
3902018
A large peptidome dataset improves HLA class I epitope prediction across most of the human population
S Sarkizova, S Klaeger, PM Le, LW Li, G Oliveira, H Keshishian, ...
Nature biotechnology 38 (2), 199-209, 2020
3812020
Use of mass spectrometry to identify protein biomarkers of disease severity in the synovial fluid and serum of patients with rheumatoid arthritis
H Liao, J Wu, E Kuhn, W Chin, B Chang, MD Jones, S O'Neil, KR Clauser, ...
Arthritis & Rheumatism 50 (12), 3792-3803, 2004
3312004
Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy
K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ...
Cell 183 (5), 1436-1456. e31, 2020
3112020
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