| Genome sequence of the Brown Norway rat yields insights into mammalian evolution RA Gibbs, et al (Rat Genome Sequencing Consortium) Nature 428 (6982), 493-521, 2004 | 2563 | 2004 |
| The genetic landscape of a cell M Costanzo, A Baryshnikova, J Bellay, Y Kim, ED Spear, CS Sevier, ... science 327 (5964), 425-431, 2010 | 2537 | 2010 |
| The ENCODE (ENCyclopedia of DNA elements) project EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ... Science 306 (5696), 636-640, 2004 | 2437 | 2004 |
| Similarity network fusion for aggregating data types on a genomic scale B Wang, AM Mezlini, F Demir, M Fiume, Z Tu, M Brudno, B Haibe-Kains, ... Nature methods 11 (3), 333-337, 2014 | 1890 | 2014 |
| ProbCons: Probabilistic consistency-based multiple sequence alignment CB Do, MSP Mahabhashyam, M Brudno, S Batzoglou Genome research 15 (2), 330-340, 2005 | 1484 | 2005 |
| LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA M Brudno, CB Do, GM Cooper, MF Kim, E Davydov, ED Green, A Sidow, ... Genome research 13 (4), 721-731, 2003 | 1378 | 2003 |
| VISTA : visualizing global DNA sequence alignments of arbitrary length C Mayor, M Brudno, JR Schwartz, A Poliakov, EM Rubin, KA Frazer, ... Bioinformatics 16 (11), 1046-1047, 2000 | 1171 | 2000 |
| The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data S Köhler, SC Doelken, CJ Mungall, S Bauer, HV Firth, I Bailleul-Forestier, ... Nucleic acids research 42 (D1), D966-D974, 2014 | 935 | 2014 |
| SHRiMP: accurate mapping of short color-space reads SM Rumble, P Lacroute, AV Dalca, M Fiume, A Sidow, M Brudno PLoS computational biology 5 (5), e1000386, 2009 | 782 | 2009 |
| Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources S Köhler, L Carmody, N Vasilevsky, JOB Jacobsen, D Danis, JP Gourdine, ... Nucleic acids research 47 (D1), D1018-D1027, 2019 | 715 | 2019 |
| Computational methods for discovering structural variation with next-generation sequencing P Medvedev, M Stanciu, M Brudno Nature methods 6 (Suppl 11), S13-S20, 2009 | 687 | 2009 |
| Genomic analysis of diffuse intrinsic pontine gliomas identifies three molecular subgroups and recurrent activating ACVR1 mutations P Buczkowicz, C Hoeman, P Rakopoulos, S Pajovic, L Letourneau, ... Nature genetics 46 (5), 451-456, 2014 | 655 | 2014 |
| The human phenotype ontology in 2017 S Köhler, NA Vasilevsky, M Engelstad, E Foster, J McMurry, S Aymé, ... Nucleic acids research 45 (D1), D865-D876, 2017 | 642 | 2017 |
| Snowflock: rapid virtual machine cloning for cloud computing HA Lagar-Cavilla, JA Whitney, AM Scannell, P Patchin, SM Rumble, ... Proceedings of the 4th ACM European conference on Computer systems, 1-12, 2009 | 596 | 2009 |
| Glocal alignment: finding rearrangements during alignment M Brudno, S Malde, A Poliakov, CB Do, O Couronne, I Dubchak, ... Bioinformatics 19 (suppl 1), i54, 2003 | 561 | 2003 |
| The Matchmaker Exchange: a platform for rare disease gene discovery AA Philippakis, DR Azzariti, S Beltran, AJ Brookes, CA Brownstein, ... Human mutation 36 (10), 915-921, 2015 | 515 | 2015 |
| SHRiMP2: sensitive yet practical short read mapping M David, M Dzamba, D Lister, L Ilie, M Brudno Bioinformatics 27 (7), 1011-1012, 2011 | 428 | 2011 |
| International cooperation to enable the diagnosis of all rare genetic diseases KM Boycott, A Rath, JX Chong, T Hartley, FS Alkuraya, G Baynam, ... The American Journal of Human Genetics 100 (5), 695-705, 2017 | 421 | 2017 |
| Active conservation of noncoding sequences revealed by three-way species comparisons I Dubchak, M Brudno, GG Loots, L Pachter, C Mayor, EM Rubin, ... Genome research 10 (9), 1304-1306, 2000 | 413 | 2000 |
| Conservation of core gene expression in vertebrate tissues ET Chan, GT Quon, G Chua, T Babak, M Trochesset, RA Zirngibl, J Aubin, ... Journal of biology 8, 1-17, 2009 | 399 | 2009 |
Serafim BatzoglouSeerVerified email at seer.bio
