The evolutionary journey of Argonaute proteins DC Swarts, K Makarova, Y Wang, K Nakanishi, RF Ketting, EV Koonin, ... Nature structural & molecular biology 21 (9), 743-753, 2014 | 481 | 2014 |
EGFR modulates microRNA maturation in response to hypoxia through phosphorylation of AGO2 J Shen, W Xia, YB Khotskaya, L Huo, K Nakanishi, SO Lim, Y Du, Y Wang, ... Nature 497 (7449), 383-387, 2013 | 432 | 2013 |
Structure of yeast Argonaute with guide RNA K Nakanishi, DE Weinberg, DP Bartel, DJ Patel Nature 486 (7403), 368-374, 2012 | 371 | 2012 |
Anatomy of RISC: how do small RNAs and chaperones activate Argonaute proteins? K Nakanishi Wiley Interdisciplinary Reviews: RNA 7 (5), 637-660, 2016 | 212 | 2016 |
ERK activation globally downregulates miRNAs through phosphorylating exportin-5 HL Sun, R Cui, JK Zhou, K Teng, YH Hsiao, K Nakanishi, M Fassan, Z Luo, ... Cancer cell 30 (5), 723-736, 2016 | 139 | 2016 |
Eukaryote-specific insertion elements control human ARGONAUTE slicer activity K Nakanishi, M Ascano, T Gogakos, S Ishibe-Murakami, AA Serganov, ... Cell reports 3 (6), 1893-1900, 2013 | 110 | 2013 |
Human Argonaute3 has slicer activity MS Park, HD Phan, F Busch, SH Hinckley, JA Brackbill, VH Wysocki, ... Nucleic acids research 45 (20), 11867-11877, 2017 | 109 | 2017 |
Structural basis for anticodon recognition by methionyl-tRNA synthetase K Nakanishi, Y Ogiso, T Nakama, S Fukai, O Nureki Nature structural & molecular biology 12 (10), 931-932, 2005 | 90 | 2005 |
The inside-out mechanism of Dicers from budding yeasts DE Weinberg, K Nakanishi, DJ Patel, DP Bartel Cell 146 (2), 262-276, 2011 | 86 | 2011 |
Recent progress of structural biology of tRNA processing and modification K Nakanishi, O Nureki Molecules and Cells 19 (2), 157-166, 2005 | 76 | 2005 |
Structural basis for translational fidelity ensured by transfer RNA lysidine synthetase K Nakanishi, L Bonnefond, S Kimura, T Suzuki, R Ishitani, O Nureki Nature 461 (7267), 1144-1148, 2009 | 75 | 2009 |
Structural basis for lysidine formation by ATP pyrophosphatase accompanied by a lysine-specific loop and a tRNA-recognition domain K Nakanishi, S Fukai, Y Ikeuchi, A Soma, Y Sekine, T Suzuki, O Nureki Proceedings of the National Academy of Sciences 102 (21), 7487-7492, 2005 | 57 | 2005 |
Anatomy of four human Argonaute proteins K Nakanishi Nucleic acids research 50 (12), 6618-6638, 2022 | 48 | 2022 |
Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module YC Li, TC Chao, HJ Kim, T Cholko, SF Chen, G Li, L Snyder, K Nakanishi, ... Science advances 7 (3), eabd4484, 2021 | 42 | 2021 |
Human Argonaute2 and Argonaute3 are catalytically activated by different lengths of guide RNA MS Park, GY Sim, AC Kehling, K Nakanishi Proceedings of the National Academy of Sciences 117 (46), 28576-28578, 2020 | 40 | 2020 |
GW182-Free microRNA Silencing Complex Controls Post-transcriptional Gene Expression during Caenorhabditis elegans Embryogenesis G Jannot, P Michaud, M Quévillon Huberdeau, L Morel-Berryman, ... PLoS genetics 12 (12), e1006484, 2016 | 38 | 2016 |
Multidomain convergence of Argonaute during RISC assembly correlates with the formation of internal water clusters MS Park, R Araya-Secchi, JA Brackbill, HD Phan, AC Kehling, ... Molecular cell 75 (4), 725-740. e6, 2019 | 31 | 2019 |
Argonaute-based programmable RNase as a tool for cleavage of highly-structured RNA DM Dayeh, WA Cantara, JP Kitzrow, K Musier-Forsyth, K Nakanishi Nucleic acids research 46 (16), e98-e98, 2018 | 24 | 2018 |
Conformational and chemical selection by a trans-acting editing domain EM Danhart, M Bakhtina, WA Cantara, AB Kuzmishin, X Ma, BL Sanford, ... Proceedings of the National Academy of Sciences 114 (33), E6774-E6783, 2017 | 22 | 2017 |
Relation between tRNase activity and the structure of colicin D according to X-ray crystallography S Yajima, K Nakanishi, K Takahashi, T Ogawa, M Hidaka, Y Kezuka, ... Biochemical and biophysical research communications 322 (3), 966-973, 2004 | 21 | 2004 |